3D structure

PDB id
8ANY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
UCACAA
Length
6 nucleotides
Bulged bases
8ANY|1|A|C|3157
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8ANY_037 not in the Motif Atlas
Geometric match to HL_5FMZ_001
Geometric discrepancy: 0.1753
The information below is about HL_5FMZ_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91813.1
Basepair signature
cWW-cSW-F
Number of instances in this motif group
24

Unit IDs

8ANY|1|A|U|3154
8ANY|1|A|C|3155
8ANY|1|A|A|3156
8ANY|1|A|C|3157
8ANY|1|A|A|3158
8ANY|1|A|A|3159

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain O
39S ribosomal protein L17, mitochondrial
Chain Q
39S ribosomal protein L19, mitochondrial

Coloring options:


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