HL_8ANY_053
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GAUAAACCCC
- Length
- 10 nucleotides
- Bulged bases
- 8ANY|1|AA|C|1225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ANY_053 not in the Motif Atlas
- Geometric match to HL_4V9F_003
- Geometric discrepancy: 0.1883
- The information below is about HL_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.9
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
8ANY|1|AA|G|1217
8ANY|1|AA|A|1218
8ANY|1|AA|U|1219
8ANY|1|AA|A|1220
8ANY|1|AA|A|1221
8ANY|1|AA|A|1222
8ANY|1|AA|C|1223
8ANY|1|AA|C|1224
8ANY|1|AA|C|1225
8ANY|1|AA|C|1226
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain Aw
- A/A-tRNA
- Chain Ax
- Transfer RNA; tRNA
Coloring options: