HL_8AP4_001
3D structure
- PDB id
- 8AP4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGCCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8AP4|1|Z|G|18, 8AP4|1|Z|G|19, 8AP4|1|Z|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AP4_001 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.4869
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8AP4|1|Z|C|13
8AP4|1|Z|A|14
8AP4|1|Z|G|15
8AP4|1|Z|C|16
8AP4|1|Z|C|17
8AP4|1|Z|G|18
8AP4|1|Z|G|19
8AP4|1|Z|U|20
8AP4|1|Z|A|21
8AP4|1|Z|G|22
Current chains
- Chain Z
- P-tRNA
Nearby chains
- Chain A
- Heat shock protein 15
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
Coloring options: