HL_8AP4_024

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

8AP4|1|a|A|715

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8AP4_024 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.3158

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8AP4|1|a|G|712
8AP4|1|a|G|713
8AP4|1|a|U|714
8AP4|1|a|A|715
8AP4|1|a|A|716
8AP4|1|a|C|717
8AP4|1|a|A|718
8AP4|1|a|C|719

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2