HL_8AP4_031

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCCAGACAGCGUCGAG

Length

16 nucleotides

Bulged bases

8AP4|1|a|A|1046

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AP4|1|a|C|1043
8AP4|1|a|C|1044
8AP4|1|a|C|1045
8AP4|1|a|A|1046
8AP4|1|a|G|1047
8AP4|1|a|A|1048
8AP4|1|a|C|1049
8AP4|1|a|A|1050
8AP4|1|a|G|1051
8AP4|1|a|C|1052
8AP4|1|a|G|1107
8AP4|1|a|U|1108
8AP4|1|a|C|1109
8AP4|1|a|G|1110
8AP4|1|a|A|1111
8AP4|1|a|G|1112

Current chains

Chain a

23S rRNA

Nearby chains

Chain g

50S ribosomal protein L6