HL_8AP4_050

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

8AP4|1|a|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8AP4_050 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.1225

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

8AP4|1|a|G|1949
8AP4|1|a|G|1950
8AP4|1|a|U|1951
8AP4|1|a|A|1952
8AP4|1|a|A|1953
8AP4|1|a|G|1954
8AP4|1|a|U|1955
8AP4|1|a|U|1956
8AP4|1|a|C|1957

Current chains

Chain a

23S rRNA

Nearby chains

Chain j

50S ribosomal protein L14