HL_8AYE_042
3D structure
- PDB id
- 8AYE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome bound to thermorubin and fMet-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.96 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AYE_042 not in the Motif Atlas
- Homologous match to HL_5J7L_141
- Geometric discrepancy: 0.0469
- The information below is about HL_5J7L_141
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8AYE|1|a|C|246
8AYE|1|a|G|247
8AYE|1|a|G|248
8AYE|1|a|C|249
8AYE|1|a|G|250
8AYE|1|a|A|251
8AYE|1|a|G|252
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain 5
- E-site tRNA
- Chain k
- 50S ribosomal protein L15
Coloring options: