HL_8AYE_052
3D structure
- PDB id
- 8AYE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome bound to thermorubin and fMet-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.96 Å
Loop
- Sequence
- CGAAUAG
- Length
- 7 nucleotides
- Bulged bases
- 8AYE|1|a|U|615
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AYE_052 not in the Motif Atlas
- Geometric match to HL_3DIL_003
- Geometric discrepancy: 0.199
- The information below is about HL_3DIL_003
- Detailed Annotation
- GNRA
- Broad Annotation
- GNRA
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8AYE|1|a|C|611
8AYE|1|a|G|612
8AYE|1|a|A|613
8AYE|1|a|A|614
8AYE|1|a|U|615
8AYE|1|a|A|616
8AYE|1|a|G|617
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
Coloring options: