HL_8B6C_012

3D structure

PDB id

8B6C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GACGCCUCGCCGGCGGGCGCGACCCC

Length

26 nucleotides

Bulged bases

8B6C|1|5|C|791, 8B6C|1|5|C|797

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B6C|1|5|G|756
8B6C|1|5|A|757
8B6C|1|5|C|758
8B6C|1|5|G|759
8B6C|1|5|C|760
8B6C|1|5|C|761
8B6C|1|5|U|762
8B6C|1|5|C|763
8B6C|1|5|G|764
8B6C|1|5|C|765
8B6C|1|5|C|784
8B6C|1|5|G|785
8B6C|1|5|G|786
8B6C|1|5|C|787
8B6C|1|5|G|788
8B6C|1|5|G|789
8B6C|1|5|G|790
8B6C|1|5|C|791
8B6C|1|5|G|792
8B6C|1|5|C|793
8B6C|1|5|G|794
8B6C|1|5|A|795
8B6C|1|5|C|796
8B6C|1|5|C|797
8B6C|1|5|C|798
8B6C|1|5|C|799

Current chains

Chain 5

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L9