HL_8B7Y_009

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8B7Y|1|C|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8B7Y_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1219

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

8B7Y|1|C|C|342
8B7Y|1|C|U|343
8B7Y|1|C|A|344
8B7Y|1|C|C|345
8B7Y|1|C|G|346
8B7Y|1|C|G|347

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L14

Chain X

50S ribosomal protein L19