HL_8B7Y_022

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

8B7Y|1|C|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8B7Y_022 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.3396

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

8B7Y|1|C|C|1027
8B7Y|1|C|C|1028
8B7Y|1|C|U|1029
8B7Y|1|C|U|1030
8B7Y|1|C|C|1031
8B7Y|1|C|G|1032
8B7Y|1|C|G|1033
8B7Y|1|C|G|1034

Current chains

Chain C

16S ribosomal RNA

Nearby chains