HL_8B7Y_104
3D structure
- PDB id
- 8B7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8B7Y_104 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1006
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8B7Y|1|n|G|32
8B7Y|1|n|C|33
8B7Y|1|n|U|34
8B7Y|1|n|C|35
8B7Y|1|n|A|36
8B7Y|1|n|U|37
8B7Y|1|n|A|38
8B7Y|1|n|A|39
8B7Y|1|n|C|40
Current chains
- Chain n
- P-tRNA fMet
Nearby chains
- Chain 6
- messenger RNA
- Chain C
- Small subunit ribosomal RNA; SSU rRNA
- Chain Q
- 30S ribosomal protein S9
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