HL_8BF7_002
3D structure
- PDB id
- 8BF7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BF7_002 not in the Motif Atlas
- Homologous match to HL_5J7L_135
- Geometric discrepancy: 0.1469
- The information below is about HL_5J7L_135
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80241.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8BF7|1|0|U|87
8BF7|1|0|G|88
8BF7|1|0|A|89
8BF7|1|0|U|90
8BF7|1|0|A|91
8BF7|1|0|U|92
8BF7|1|0|G|93
8BF7|1|0|A|94
8BF7|1|0|A|95
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L23
- Chain R
- 50S ribosomal protein L24
- Chain V
- 50S ribosomal protein L29
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