HL_8BGE_086

3D structure

PDB id

8BGE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

GGAUUAGAUACCC

Length

13 nucleotides

Bulged bases

8BGE|1|2|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGE|1|2|G|785
8BGE|1|2|G|786
8BGE|1|2|A|787
8BGE|1|2|U|788
8BGE|1|2|U|789
8BGE|1|2|A|790
8BGE|1|2|G|791
8BGE|1|2|A|792
8BGE|1|2|U|793
8BGE|1|2|A|794
8BGE|1|2|C|795
8BGE|1|2|C|796
8BGE|1|2|C|797

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain 0

Large subunit ribosomal RNA; LSU rRNA

Chain 3

mRNA

Chain 4

Transfer RNA; tRNA

Chain o

30S ribosomal protein S11

Chain y

30S ribosomal protein S21