HL_8BGH_076
3D structure
- PDB id
- 8BGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- UGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BGH_076 not in the Motif Atlas
- Homologous match to HL_4LFB_007
- Geometric discrepancy: 0.1209
- The information below is about HL_4LFB_007
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
8BGH|1|2|U|296
8BGH|1|2|G|297
8BGH|1|2|A|298
8BGH|1|2|G|299
8BGH|1|2|A|300
8BGH|1|2|G|301
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain h
- 30S ribosomal protein S4
- Chain i
- 30S ribosomal protein S5
- Chain p
- 30S ribosomal protein S12
- Chain u
- 30S ribosomal protein S17
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