HL_8BGH_086

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

GGAUUAGAUACCC

Length

13 nucleotides

Bulged bases

8BGH|1|2|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|2|G|785
8BGH|1|2|G|786
8BGH|1|2|A|787
8BGH|1|2|U|788
8BGH|1|2|U|789
8BGH|1|2|A|790
8BGH|1|2|G|791
8BGH|1|2|A|792
8BGH|1|2|U|793
8BGH|1|2|A|794
8BGH|1|2|C|795
8BGH|1|2|C|796
8BGH|1|2|C|797

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain 0

Large subunit ribosomal RNA; LSU rRNA

Chain 3

mRNA

Chain 4

Transfer RNA; tRNA

Chain o

30S ribosomal protein S11

Chain y

30S ribosomal protein S21