HL_8BGH_087

3D structure

PDB id

8BGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

UUGA

Length

4 nucleotides

Bulged bases

8BGH|1|2|U|843

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BGH_087 not in the Motif Atlas

Homologous match to HL_6CZR_089

Geometric discrepancy: 0.5423

The information below is about HL_6CZR_089

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

8BGH|1|2|U|842
8BGH|1|2|U|843
8BGH|1|2|G|844
8BGH|1|2|A|845

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain v

30S ribosomal protein S18