HL_8BH4_087

3D structure

PDB id

8BH4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

UUGA

Length

4 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BH4_087 not in the Motif Atlas

Geometric match to HL_8K2Z_002

Geometric discrepancy: 0.3117

The information below is about HL_8K2Z_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_04852.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

8BH4|1|2|U|842
8BH4|1|2|U|843
8BH4|1|2|G|844
8BH4|1|2|A|845

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain v

30S ribosomal protein S18