HL_8BHJ_025

3D structure

PDB id

8BHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.81 Å

Loop

Sequence

GGGGGCUUACC

Length

11 nucleotides

Bulged bases

8BHJ|1|0|A|896

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|G|879
8BHJ|1|0|G|880
8BHJ|1|0|G|881
8BHJ|1|0|G|882
8BHJ|1|0|G|883
8BHJ|1|0|C|893
8BHJ|1|0|U|894
8BHJ|1|0|U|895
8BHJ|1|0|A|896
8BHJ|1|0|C|897
8BHJ|1|0|C|898

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain J

50S ribosomal protein L16