HL_8BHJ_028
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CCCAGACAGCCGAG
- Length
- 14 nucleotides
- Bulged bases
- 8BHJ|1|0|A|1046
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_028 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.1293
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
8BHJ|1|0|C|1043
8BHJ|1|0|C|1044
8BHJ|1|0|C|1045
8BHJ|1|0|A|1046
8BHJ|1|0|G|1047
8BHJ|1|0|A|1048
8BHJ|1|0|C|1049
8BHJ|1|0|A|1050
8BHJ|1|0|G|1051
8BHJ|1|0|C|1052
8BHJ|1|0|C|1109
8BHJ|1|0|G|1110
8BHJ|1|0|A|1111
8BHJ|1|0|G|1112
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
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