HL_8BHJ_069
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 8BHJ|1|1|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_069 not in the Motif Atlas
- Homologous match to HL_5J7L_203
- Geometric discrepancy: 0.2272
- The information below is about HL_5J7L_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8BHJ|1|1|C|38
8BHJ|1|1|A|39
8BHJ|1|1|U|40
8BHJ|1|1|G|41
8BHJ|1|1|C|42
8BHJ|1|1|C|43
8BHJ|1|1|G|44
Current chains
- Chain 1
- 5S rRNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 50S ribosomal protein L5
- Chain L
- 50S ribosomal protein L18
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