HL_8BHJ_080
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_080 not in the Motif Atlas
- Homologous match to HL_4LFB_010
- Geometric discrepancy: 0.2018
- The information below is about HL_4LFB_010
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
8BHJ|1|2|C|379
8BHJ|1|2|G|380
8BHJ|1|2|C|381
8BHJ|1|2|A|382
8BHJ|1|2|A|383
8BHJ|1|2|G|384
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain t
- 30S ribosomal protein S16
Coloring options: