HL_8BHJ_110
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GUGCAAUGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_110 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.3141
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8BHJ|1|0|G|2323
8BHJ|1|0|U|2324
8BHJ|1|0|G|2325
8BHJ|1|0|C|2326
8BHJ|1|0|A|2327
8BHJ|1|0|A|2328
8BHJ|1|0|U|2329
8BHJ|1|0|G|2330
8BHJ|1|0|G|2331
8BHJ|1|0|C|2332
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain D
- 50S ribosomal protein L5
- Chain T
- 50S ribosomal protein L27
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