HL_8BHL_081

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8BHL|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHL_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2194

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8BHL|1|2|G|462
8BHL|1|2|U|463
8BHL|1|2|U|464
8BHL|1|2|A|465
8BHL|1|2|A|466
8BHL|1|2|U|467
8BHL|1|2|A|468
8BHL|1|2|C|469
8BHL|1|2|C|470

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains