HL_8BHL_102
3D structure
- PDB id
- 8BHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 8BHL|1|4|C|15, 8BHL|1|4|G|18, 8BHL|1|4|G|19, 8BHL|1|4|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHL_102 not in the Motif Atlas
- Homologous match to HL_1QF6_001
- Geometric discrepancy: 0.1363
- The information below is about HL_1QF6_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
8BHL|1|4|C|12
8BHL|1|4|A|13
8BHL|1|4|G|14
8BHL|1|4|C|15
8BHL|1|4|C|16
8BHL|1|4|U|17
8BHL|1|4|G|18
8BHL|1|4|G|19
8BHL|1|4|U|20
8BHL|1|4|A|21
8BHL|1|4|G|22
Current chains
- Chain 4
- Acylated P-site tRNA(fMet)
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 50S ribosomal protein L5
Coloring options: