HL_8BHN_091

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAAC

Length

35 nucleotides

Bulged bases

8BHN|1|2|C|1028, 8BHN|1|2|U|1030, 8BHN|1|2|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHN|1|2|G|1003
8BHN|1|2|A|1004
8BHN|1|2|A|1005
8BHN|1|2|G|1006
8BHN|1|2|U|1007
8BHN|1|2|U|1008
8BHN|1|2|U|1009
8BHN|1|2|U|1010
8BHN|1|2|C|1011
8BHN|1|2|A|1012
8BHN|1|2|G|1013
8BHN|1|2|A|1014
8BHN|1|2|G|1015
8BHN|1|2|A|1016
8BHN|1|2|U|1017
8BHN|1|2|G|1018
8BHN|1|2|A|1019
8BHN|1|2|G|1020
8BHN|1|2|A|1021
8BHN|1|2|A|1022
8BHN|1|2|U|1023
8BHN|1|2|G|1024
8BHN|1|2|U|1025
8BHN|1|2|G|1026
8BHN|1|2|C|1027
8BHN|1|2|C|1028
8BHN|1|2|U|1029
8BHN|1|2|U|1030
8BHN|1|2|C|1031
8BHN|1|2|G|1032
8BHN|1|2|G|1033
8BHN|1|2|G|1034
8BHN|1|2|A|1035
8BHN|1|2|A|1036
8BHN|1|2|C|1037

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain r

30S ribosomal protein S14

Chain w

30S ribosomal protein S19