HL_8BHN_094

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8BHN|1|2|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHN_094 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.2525

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8BHN|1|2|G|1134
8BHN|1|2|U|1135
8BHN|1|2|C|1136
8BHN|1|2|C|1137
8BHN|1|2|G|1138
8BHN|1|2|G|1139
8BHN|1|2|C|1140

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain m

30S ribosomal protein S9