HL_8BHP_025
3D structure
- PDB id
- 8BHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.37 Å
Loop
- Sequence
- GUGCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 8BHP|1|0|U|958, 8BHP|1|0|C|961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHP_025 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.241
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8BHP|1|0|G|954
8BHP|1|0|U|955
8BHP|1|0|G|956
8BHP|1|0|C|957
8BHP|1|0|U|958
8BHP|1|0|A|959
8BHP|1|0|A|960
8BHP|1|0|C|961
8BHP|1|0|G|962
8BHP|1|0|U|963
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 1
- 5S ribosomal RNA; 5S rRNA
- Chain J
- 50S ribosomal protein L16
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