HL_8BHP_033

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

8BHP|1|0|U|1396, 8BHP|1|0|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_033 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1343

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8BHP|1|0|G|1389
8BHP|1|0|U|1390
8BHP|1|0|U|1391
8BHP|1|0|A|1392
8BHP|1|0|A|1393
8BHP|1|0|U|1394
8BHP|1|0|A|1395
8BHP|1|0|U|1396
8BHP|1|0|U|1397
8BHP|1|0|C|1398

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain Q

50S ribosomal protein L23