HL_8BHP_045

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_045 not in the Motif Atlas

Geometric match to HL_4ZT0_006

Geometric discrepancy: 0.1659

The information below is about HL_4ZT0_006

Detailed Annotation

GNRA with GA tSW pair

Broad Annotation

GNRA with GA tSW pair

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8BHP|1|0|C|1868
8BHP|1|0|G|1869
8BHP|1|0|C|1870
8BHP|1|0|A|1871
8BHP|1|0|A|1872
8BHP|1|0|G|1873

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains