HL_8BHP_058

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_058 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.1462

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8BHP|1|0|A|2471
8BHP|1|0|G|2472
8BHP|1|0|U|2473
8BHP|1|0|U|2474
8BHP|1|0|C|2475
8BHP|1|0|A|2476
8BHP|1|0|U|2477
8BHP|1|0|A|2478
8BHP|1|0|U|2479

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain e

50S ribosomal protein L36