3D structure

PDB id
8BHP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.37 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
8BHP|1|2|A|344
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8BHP_078 not in the Motif Atlas
Homologous match to HL_4LFB_009
Geometric discrepancy: 0.0851
The information below is about HL_4LFB_009
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

8BHP|1|2|C|342
8BHP|1|2|U|343
8BHP|1|2|A|344
8BHP|1|2|C|345
8BHP|1|2|G|346
8BHP|1|2|G|347

Current chains

Chain 2
16S rRNA RRSB-RRNA

Nearby chains

Chain H
50S ribosomal protein L14
Chain M
50S ribosomal protein L19

Coloring options:


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