3D structure

PDB id
8BHP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.37 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
8BHP|1|2|U|421
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8BHP_080 not in the Motif Atlas
Homologous match to HL_4LFB_011
Geometric discrepancy: 0.1171
The information below is about HL_4LFB_011
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

8BHP|1|2|C|419
8BHP|1|2|U|420
8BHP|1|2|U|421
8BHP|1|2|C|422
8BHP|1|2|G|423
8BHP|1|2|G|424

Current chains

Chain 2
16S rRNA RRSB-RRNA

Nearby chains

Chain g
30S ribosomal protein S3
Chain h
30S ribosomal protein S4

Coloring options:


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