HL_8BHP_087

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

UUGA

Length

4 nucleotides

Bulged bases

8BHP|1|2|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_087 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.2241

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

8BHP|1|2|U|842
8BHP|1|2|U|843
8BHP|1|2|G|844
8BHP|1|2|A|845

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain v

30S ribosomal protein S18