HL_8BIL_003

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

8BIL|1|0|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_003 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1191

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8BIL|1|0|G|123
8BIL|1|0|G|124
8BIL|1|0|A|125
8BIL|1|0|A|126
8BIL|1|0|A|127
8BIL|1|0|C|128

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain Q

50S ribosomal protein L23

Chain c

50S ribosomal protein L34