HL_8BIL_033

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

8BIL|1|0|U|1396, 8BIL|1|0|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_033 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1328

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8BIL|1|0|G|1389
8BIL|1|0|U|1390
8BIL|1|0|U|1391
8BIL|1|0|A|1392
8BIL|1|0|A|1393
8BIL|1|0|U|1394
8BIL|1|0|A|1395
8BIL|1|0|U|1396
8BIL|1|0|U|1397
8BIL|1|0|C|1398

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain Q

50S ribosomal protein L23