HL_8BIL_065

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

8BIL|1|0|U|2797, 8BIL|1|0|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_065 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.176

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8BIL|1|0|C|2795
8BIL|1|0|U|2796
8BIL|1|0|U|2797
8BIL|1|0|U|2798
8BIL|1|0|A|2799
8BIL|1|0|A|2800
8BIL|1|0|G|2801

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains