HL_8BIL_077

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_077 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1168

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8BIL|1|2|A|320
8BIL|1|2|A|321
8BIL|1|2|C|322
8BIL|1|2|U|323
8BIL|1|2|G|324
8BIL|1|2|A|325
8BIL|1|2|G|326
8BIL|1|2|A|327
8BIL|1|2|C|328
8BIL|1|2|A|329
8BIL|1|2|C|330
8BIL|1|2|G|331
8BIL|1|2|G|332
8BIL|1|2|U|333

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain t

30S ribosomal protein S16

Chain x

30S ribosomal protein S20