HL_8BIL_081

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8BIL|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2046

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8BIL|1|2|G|462
8BIL|1|2|U|463
8BIL|1|2|U|464
8BIL|1|2|A|465
8BIL|1|2|A|466
8BIL|1|2|U|467
8BIL|1|2|A|468
8BIL|1|2|C|469
8BIL|1|2|C|470

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains