HL_8BIL_095

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8BIL|1|2|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_095 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.4276

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8BIL|1|2|G|1134
8BIL|1|2|U|1135
8BIL|1|2|C|1136
8BIL|1|2|C|1137
8BIL|1|2|G|1138
8BIL|1|2|G|1139
8BIL|1|2|C|1140

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain m

30S ribosomal protein S9