HL_8BIM_076
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- UGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BIM_076 not in the Motif Atlas
- Homologous match to HL_4LFB_007
- Geometric discrepancy: 0.0994
- The information below is about HL_4LFB_007
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
8BIM|1|2|U|296
8BIM|1|2|G|297
8BIM|1|2|A|298
8BIM|1|2|G|299
8BIM|1|2|A|300
8BIM|1|2|G|301
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain h
- 30S ribosomal protein S4
- Chain i
- 30S ribosomal protein S5
- Chain p
- 30S ribosomal protein S12
- Chain u
- 30S ribosomal protein S17
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