HL_8BIM_086

3D structure

PDB id

8BIM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GGAUUAGAUACCC

Length

13 nucleotides

Bulged bases

8BIM|1|2|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BIM|1|2|G|785
8BIM|1|2|G|786
8BIM|1|2|A|787
8BIM|1|2|U|788
8BIM|1|2|U|789
8BIM|1|2|A|790
8BIM|1|2|G|791
8BIM|1|2|A|792
8BIM|1|2|U|793
8BIM|1|2|A|794
8BIM|1|2|C|795
8BIM|1|2|C|796
8BIM|1|2|C|797

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain 0

Large subunit ribosomal RNA; LSU rRNA

Chain 3

mRNA

Chain 4

Transfer RNA; tRNA

Chain o

30S ribosomal protein S11

Chain y

30S ribosomal protein S21