HL_8BIM_105
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- GUGCAAUGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BIM_105 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.2704
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8BIM|1|0|G|2323
8BIM|1|0|U|2324
8BIM|1|0|G|2325
8BIM|1|0|C|2326
8BIM|1|0|A|2327
8BIM|1|0|A|2328
8BIM|1|0|U|2329
8BIM|1|0|G|2330
8BIM|1|0|G|2331
8BIM|1|0|C|2332
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain T
- 50S ribosomal protein L27
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