HL_8BIP_034

3D structure

PDB id

8BIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGAUUUUAUGCAGG

Length

15 nucleotides

Bulged bases

8BIP|1|1|U|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BIP|1|1|C|1563
8BIP|1|1|U|1564
8BIP|1|1|G|1565
8BIP|1|1|A|1566
8BIP|1|1|U|1567
8BIP|1|1|U|1568
8BIP|1|1|U|1569
8BIP|1|1|U|1570
8BIP|1|1|A|1571
8BIP|1|1|U|1572
8BIP|1|1|G|1573
8BIP|1|1|C|1574
8BIP|1|1|A|1575
8BIP|1|1|G|1576
8BIP|1|1|G|1577

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C3

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L8-A

Chain LX

60S ribosomal protein L25