HL_8BJQ_044

3D structure

PDB id

8BJQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUGGUGGGGCUUGCUCUGCUAGG

Length

24 nucleotides

Bulged bases

8BJQ|1|1|U|2010, 8BJQ|1|1|G|2017

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BJQ|1|1|C|1999
8BJQ|1|1|U|2000
8BJQ|1|1|U|2001
8BJQ|1|1|G|2002
8BJQ|1|1|G|2003
8BJQ|1|1|U|2004
8BJQ|1|1|G|2005
8BJQ|1|1|G|2006
8BJQ|1|1|G|2007
8BJQ|1|1|G|2008
8BJQ|1|1|C|2009
8BJQ|1|1|U|2010
8BJQ|1|1|U|2011
8BJQ|1|1|G|2012
8BJQ|1|1|C|2013
8BJQ|1|1|U|2014
8BJQ|1|1|C|2015
8BJQ|1|1|U|2016
8BJQ|1|1|G|2017
8BJQ|1|1|C|2018
8BJQ|1|1|U|2019
8BJQ|1|1|A|2020
8BJQ|1|1|G|2021
8BJQ|1|1|G|2022

Current chains

Chain 1

25S rRNA

Nearby chains

Chain D

N-terminal acetyltransferase B complex subunit MDM20