HL_8BN3_027

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCAUGGAAGUCGG

Length

13 nucleotides

Bulged bases

8BN3|1|1|U|1241, 8BN3|1|1|G|1242, 8BN3|1|1|A|1245, 8BN3|1|1|G|1246, 8BN3|1|1|C|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|1|C|1238
8BN3|1|1|C|1239
8BN3|1|1|A|1240
8BN3|1|1|U|1241
8BN3|1|1|G|1242
8BN3|1|1|G|1243
8BN3|1|1|A|1244
8BN3|1|1|A|1245
8BN3|1|1|G|1246
8BN3|1|1|U|1247
8BN3|1|1|C|1248
8BN3|1|1|G|1249
8BN3|1|1|G|1250

Current chains

Chain 1

25S ribosomal RNA

Nearby chains