HL_8BN3_085

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGCCGGUCGGAUUUCC

Length

16 nucleotides

Bulged bases

8BN3|1|2|C|658

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|2|G|651
8BN3|1|2|G|652
8BN3|1|2|C|653
8BN3|1|2|C|654
8BN3|1|2|G|655
8BN3|1|2|G|656
8BN3|1|2|U|657
8BN3|1|2|C|658
8BN3|1|2|G|676
8BN3|1|2|G|677
8BN3|1|2|A|678
8BN3|1|2|U|679
8BN3|1|2|U|680
8BN3|1|2|U|681
8BN3|1|2|C|682
8BN3|1|2|C|683

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S9

Small ribosomal subunit protein uS4A