HL_8BN3_122

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGCCCAUUCGGGUC

Length

14 nucleotides

Bulged bases

8BN3|1|2|A|492, 8BN3|1|2|U|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BN3|1|2|G|487
8BN3|1|2|G|488
8BN3|1|2|C|489
8BN3|1|2|C|490
8BN3|1|2|C|491
8BN3|1|2|A|492
8BN3|1|2|U|493
8BN3|1|2|U|494
8BN3|1|2|C|495
8BN3|1|2|G|496
8BN3|1|2|G|497
8BN3|1|2|G|498
8BN3|1|2|U|499
8BN3|1|2|C|500

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E0

40S ribosomal protein S30-A