HL_8BRM_008
3D structure
- PDB id
- 8BRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state, no E-site tRNA (A6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CAACCG
- Length
- 6 nucleotides
- Bulged bases
- 8BRM|1|Lt|C|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BRM_008 not in the Motif Atlas
- Homologous match to HL_8C3A_002
- Geometric discrepancy: 0.2206
- The information below is about HL_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8BRM|1|Lt|C|68
8BRM|1|Lt|A|69
8BRM|1|Lt|A|70
8BRM|1|Lt|C|71
8BRM|1|Lt|C|72
8BRM|1|Lt|G|73
Current chains
- Chain Lt
- Large Subunit rRNA
Nearby chains
- Chain LM
- Ribosomal protein L13
- Chain LO
- Ribosomal protein L15
- Chain Lb
- Ribosomal protein L27a
- Chain Lj
- Ribosomal protein L36-1
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