HL_8BRM_028

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GGGCCUGCCC

Length

10 nucleotides

Bulged bases

8BRM|1|Lt|C|742

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|Lt|G|735
8BRM|1|Lt|G|736
8BRM|1|Lt|G|737
8BRM|1|Lt|C|738
8BRM|1|Lt|C|739
8BRM|1|Lt|U|740
8BRM|1|Lt|G|741
8BRM|1|Lt|C|742
8BRM|1|Lt|C|743
8BRM|1|Lt|C|744

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain SR

Ribosomal protein S15

Chain SV

Ribosomal protein S18